STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934685_03028Unannotated protein. (287 aa)    
Predicted Functional Partners:
GCA_000934685_00114
Unannotated protein.
  
 0.990
GCA_000934685_01054
Unannotated protein.
 
 
 0.989
GCA_000934685_00683
Unannotated protein.
 
  
 0.889
GCA_000934685_01550
Unannotated protein.
 
   
 0.828
GCA_000934685_01080
Unannotated protein.
  
 0.826
GCA_000934685_01481
Unannotated protein.
 
   
 0.822
GCA_000934685_02523
Unannotated protein.
 
   
 0.803
GCA_000934685_00321
Unannotated protein.
 
   
 0.781
GCA_000934685_03027
Unannotated protein.
       0.773
GCA_000934685_00319
Unannotated protein.
 
  
 0.732
Your Current Organism:
Lacinutrix sp. HelI90
NCBI taxonomy Id: 1249999
Other names: L. sp. Hel_I_90, Lacinutrix sp. Hel_I_90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.