STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799465_00674Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_000799465_00721
Unannotated protein.
  
 
 0.999
GCA_000799465_03039
Unannotated protein.
  
 0.999
GCA_000799465_00838
Unannotated protein.
 
 
 0.990
GCA_000799465_02685
Unannotated protein.
 
 
 0.990
GCA_000799465_00945
Unannotated protein.
   
 0.984
GCA_000799465_02020
Unannotated protein.
  
 
 0.958
GCA_000799465_00673
Unannotated protein.
 
     0.840
GCA_000799465_00919
Unannotated protein.
    
 0.787
GCA_000799465_01380
Unannotated protein.
    
 0.787
GCA_000799465_00669
Unannotated protein.
 
  
 0.721
Your Current Organism:
Psychroserpens sp. HelI66
NCBI taxonomy Id: 1250004
Other names: P. sp. Hel_I_66, Psychroserpens sp. Hel_I_66
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.