STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799465_01594Unannotated protein. (438 aa)    
Predicted Functional Partners:
GCA_000799465_00054
Unannotated protein.
 
  
 0.962
GCA_000799465_01010
Unannotated protein.
  
 
 0.909
GCA_000799465_03403
Unannotated protein.
    
  0.877
GCA_000799465_01044
Unannotated protein.
    
 0.873
GCA_000799465_01959
Unannotated protein.
    
  0.872
GCA_000799465_01595
Unannotated protein.
 
    0.870
GCA_000799465_03371
Unannotated protein.
 
  
 0.818
GCA_000799465_02054
Unannotated protein.
 
  
 0.798
GCA_000799465_03375
Unannotated protein.
 
  
 0.765
GCA_000799465_03372
Unannotated protein.
 
   
 0.762
Your Current Organism:
Psychroserpens sp. HelI66
NCBI taxonomy Id: 1250004
Other names: P. sp. Hel_I_66, Psychroserpens sp. Hel_I_66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.