STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03185.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
SDS03147.1
Hypothetical protein.
 
     0.961
SDS03230.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.828
SDR99540.1
Hypothetical protein.
  
     0.739
SDS58122.1
Hypothetical protein.
  
     0.738
SDS03107.1
Peptidase family M23.
 
     0.731
SDR66725.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
     0.708
SDS38696.1
Hypothetical protein.
  
     0.694
SDS54562.1
Hypothetical protein.
  
     0.693
SDS62538.1
G:T/U-mismatch repair DNA glycosylase.
  
     0.682
SDS38671.1
Hypothetical protein.
  
     0.672
Your Current Organism:
Gramella sp. MAR2010147
NCBI taxonomy Id: 1250205
Other names: G. sp. MAR_2010_147, Gramella sp. MAR_2010_147
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.