STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdhAPyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (333 aa)    
Predicted Functional Partners:
SDR75170.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 0.999
SDS04168.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.999
SDS23652.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
0.984
SDS29802.1
Dihydrolipoamide dehydrogenase.
 
 
 0.983
SDR98155.1
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.977
SDS18388.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
 
 0.974
SDR77356.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.968
SDS38894.1
2-oxoisovalerate dehydrogenase E1 component.
 
0.958
SDR89548.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.940
SDS20780.1
Dihydrolipoamide dehydrogenase.
 
 
 0.918
Your Current Organism:
Gramella sp. MAR2010102
NCBI taxonomy Id: 1250231
Other names: G. sp. MAR_2010_102, Gramella sp. MAR_2010_102
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