STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB22400.1Glycosyltransferase involved in cell wall bisynthesis. (325 aa)    
Predicted Functional Partners:
SDB22381.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.809
SDB22418.1
Glycosyl transferase family 2.
 
    
0.775
SDB22592.1
Glycosyltransferase, GT2 family.
 
     0.694
SDB22473.1
Colanic acid/amylovoran biosynthesis glycosyltransferase.
 
 
  0.620
SDB22700.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.585
SDB22514.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.578
SDB22363.1
Hypothetical protein.
       0.536
SDB22436.1
Hypothetical protein.
       0.529
SDB22635.1
Glycosyl transferases group 1.
 
 
  0.522
SDB64989.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 
0.488
Your Current Organism:
Flavobacteriaceae bacterium MAR2010188
NCBI taxonomy Id: 1250295
Other names: F. bacterium MAR_2010_188, Flavobacteriaceae bacterium MAR_2010_188
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