STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB34016.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
SDB33992.1
Hypothetical protein.
       0.785
SDB33972.1
Hydrogenase large subunit.
       0.784
SDB34086.1
Hydrogenase maturation protease.
       0.759
SDB34039.1
Hypothetical protein.
       0.757
SDB34063.1
Hypothetical protein.
       0.756
SDB33923.1
Hypothetical protein.
       0.663
SDB33950.1
Hypothetical protein.
       0.663
SDB33900.1
Hypothetical protein.
       0.662
SDB33872.1
Hypothetical protein.
       0.655
SDB33825.1
Hydrogenase small subunit.
       0.639
Your Current Organism:
Flavobacteriaceae bacterium MAR2010188
NCBI taxonomy Id: 1250295
Other names: F. bacterium MAR_2010_188, Flavobacteriaceae bacterium MAR_2010_188
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.