STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB42413.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
SDB42397.1
Outer membrane receptor proteins, mostly Fe transport.
       0.752
SDB42380.1
Peptidase family M23.
       0.730
SDB42431.1
Hypothetical protein.
       0.519
SDB42348.1
Cell division protein ZapA.
 
     0.487
SDB55001.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.464
SDB50073.1
AsmA-like C-terminal region.
  
     0.447
SDB42363.1
Hypothetical protein.
       0.425
Your Current Organism:
Flavobacteriaceae bacterium MAR2010188
NCBI taxonomy Id: 1250295
Other names: F. bacterium MAR_2010_188, Flavobacteriaceae bacterium MAR_2010_188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.