STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB46976.1Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (485 aa)    
Predicted Functional Partners:
recR
DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.612
SDB46942.1
Glycosyltransferase, GT2 family.
  
    0.565
SDB39030.1
L-proline dehydrogenase.
  
  
 0.561
SDB48617.1
L-proline dehydrogenase.
  
  
 0.561
SDB66126.1
GAF domain-containing protein.
     
 0.495
SDB46348.1
Membrane associated serine protease, rhomboid family.
  
     0.460
SDB47836.1
Uncharacterized conserved protein YbbC, DUF1343 family.
     0.456
SDB46926.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
       0.402
Your Current Organism:
Flavobacteriaceae bacterium MAR2010188
NCBI taxonomy Id: 1250295
Other names: F. bacterium MAR_2010_188, Flavobacteriaceae bacterium MAR_2010_188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.