STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB54053.1Protein of unknown function. (415 aa)    
Predicted Functional Partners:
SDB57973.1
Protein involved in gliding motility SprA.
  
 
   0.999
SDB54403.1
Hypothetical protein.
  
   
 0.793
SDB55545.1
Protein involved in gliding motility GldB.
  
     0.761
SDB62203.1
Protein involved in gliding motility SprE.
  
     0.754
SDB54425.1
Protein involved in gliding motility GldJ.
  
     0.749
SDB66356.1
Probable protein-translocating porin PorT.
  
     0.744
SDB46603.1
Protein involved in gliding motility GldI.
  
 
   0.743
SDB64087.1
Protein involved in gliding motility GldD.
  
     0.728
SDB43489.1
Protein of unknown function.
  
     0.715
SDB52808.1
Protein involved in gliding motility GldK.
  
     0.710
Your Current Organism:
Flavobacteriaceae bacterium MAR2010188
NCBI taxonomy Id: 1250295
Other names: F. bacterium MAR_2010_188, Flavobacteriaceae bacterium MAR_2010_188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.