Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB52740.1 | SDB56698.1 | SAMN03097699_1923 | SAMN03097699_2180 | Glycine/D-amino acid oxidase. | Glutamate synthase (NADH) large subunit. | 0.919 |
SDB52740.1 | SDB65845.1 | SAMN03097699_1923 | SAMN03097699_3153 | Glycine/D-amino acid oxidase. | Pyridine nucleotide-disulphide oxidoreductase. | 0.857 |
SDB55435.1 | SDB56698.1 | SAMN03097699_2103 | SAMN03097699_2180 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADH) large subunit. | 0.893 |
SDB55435.1 | SDB62185.1 | SAMN03097699_2103 | SAMN03097699_2690 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.694 |
SDB55435.1 | SDB64326.1 | SAMN03097699_2103 | SAMN03097699_2944 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.771 |
SDB55435.1 | SDB65838.1 | SAMN03097699_2103 | SAMN03097699_3152 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 4Fe-4S binding domain-containing protein. | 0.767 |
SDB55435.1 | SDB65845.1 | SAMN03097699_2103 | SAMN03097699_3153 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Pyridine nucleotide-disulphide oxidoreductase. | 0.898 |
SDB56698.1 | SDB52740.1 | SAMN03097699_2180 | SAMN03097699_1923 | Glutamate synthase (NADH) large subunit. | Glycine/D-amino acid oxidase. | 0.919 |
SDB56698.1 | SDB55435.1 | SAMN03097699_2180 | SAMN03097699_2103 | Glutamate synthase (NADH) large subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.893 |
SDB56698.1 | SDB61348.1 | SAMN03097699_2180 | SAMN03097699_2599 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.919 |
SDB56698.1 | SDB62185.1 | SAMN03097699_2180 | SAMN03097699_2690 | Glutamate synthase (NADH) large subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.893 |
SDB56698.1 | SDB64326.1 | SAMN03097699_2180 | SAMN03097699_2944 | Glutamate synthase (NADH) large subunit. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.902 |
SDB56698.1 | SDB65838.1 | SAMN03097699_2180 | SAMN03097699_3152 | Glutamate synthase (NADH) large subunit. | 4Fe-4S binding domain-containing protein. | 0.898 |
SDB56698.1 | SDB65845.1 | SAMN03097699_2180 | SAMN03097699_3153 | Glutamate synthase (NADH) large subunit. | Pyridine nucleotide-disulphide oxidoreductase. | 0.933 |
SDB58259.1 | SDB65845.1 | SAMN03097699_2292 | SAMN03097699_3153 | Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit. | Pyridine nucleotide-disulphide oxidoreductase. | 0.996 |
SDB61348.1 | SDB56698.1 | SAMN03097699_2599 | SAMN03097699_2180 | Hypothetical protein. | Glutamate synthase (NADH) large subunit. | 0.919 |
SDB61348.1 | SDB65845.1 | SAMN03097699_2599 | SAMN03097699_3153 | Hypothetical protein. | Pyridine nucleotide-disulphide oxidoreductase. | 0.857 |
SDB62185.1 | SDB55435.1 | SAMN03097699_2690 | SAMN03097699_2103 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.694 |
SDB62185.1 | SDB56698.1 | SAMN03097699_2690 | SAMN03097699_2180 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADH) large subunit. | 0.893 |
SDB62185.1 | SDB64326.1 | SAMN03097699_2690 | SAMN03097699_2944 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.771 |
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