STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB65845.1Pyridine nucleotide-disulphide oxidoreductase. (436 aa)    
Predicted Functional Partners:
SDB58259.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
   
 0.996
SDB56698.1
Glutamate synthase (NADH) large subunit.
    
 0.933
SDB64326.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.917
SDB65838.1
4Fe-4S binding domain-containing protein.
 
   
 0.905
SDB55435.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.898
SDB62185.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.898
SDB65852.1
Hypothetical protein.
 
     0.883
SDB65832.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.858
SDB52740.1
Glycine/D-amino acid oxidase.
   
 0.857
SDB61348.1
Hypothetical protein.
   
 0.857
Your Current Organism:
Flavobacteriaceae bacterium MAR2010188
NCBI taxonomy Id: 1250295
Other names: F. bacterium MAR_2010_188, Flavobacteriaceae bacterium MAR_2010_188
Server load: low (18%) [HD]