STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ51702.1Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1. (225 aa)    
Predicted Functional Partners:
APZ51703.1
PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1.
 
 
 0.978
APZ51704.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.976
APZ51705.1
Outer membrane transport energization protein TonB; PFAM: TonB C terminal; TIGRFAM: TonB family C-terminal domain; TC 2.C.1.1.1.
 
 
 0.972
APZ51701.1
Hypothetical protein.
 
     0.954
APZ51441.1
PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1.
 
 
 0.896
APZ51706.1
Hemoglobin/transferrin/lactoferrin receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
  
 0.865
APZ51440.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.859
APZ52143.1
Cell division and transport-associated protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TC 2.C.1.2.1.
 
 
 0.782
APZ51707.1
Putative hemin transport protein; PFAM: Haemin-degrading HemS.ChuX domain.
 
  
 0.734
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.686
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.