STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ51916.1Thiamin ABC transporter, transmembrane component. (232 aa)    
Predicted Functional Partners:
APZ51915.1
Thiamin ABC transporter, transmembrane component.
  
  0.999
APZ51917.1
Thiamine transport system substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein.
 
 
 0.994
thiQ
Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
 
 
 0.993
APZ51357.1
iron(III) transport system substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein.
 
  
 0.604
APZ51918.1
Hypothetical protein.
       0.594
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.545
APZ53221.1
iron(III) transport system substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.538
APZ54559.1
iron(III) transport system substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.538
APZ51438.1
Iron complex transport system ATP-binding protein; PFAM: ABC transporter.
   
  
 0.409
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.