STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ52238.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Periplasmic binding protein. (401 aa)    
Predicted Functional Partners:
APZ52236.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
  
 0.956
APZ52237.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter.
 
  
 0.949
APZ52241.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.927
APZ54970.1
Amino acid/amide ABC transporter substrate-binding protein; PFAM: Periplasmic binding protein.
  
  
  0.921
APZ52239.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.919
APZ52240.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.919
APZ52099.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Periplasmic binding protein.
   
 
  0.900
APZ53493.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Periplasmic binding protein.
   
 
 
0.900
APZ54676.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Periplasmic binding protein.
   
 
  0.900
APZ54971.1
Amino acid/amide ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.821
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.