STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ52937.1PFAM: Transposase. (136 aa)    
Predicted Functional Partners:
APZ52936.1
Transposase; PFAM: IS66 Orf2 like protein.
 
  
 0.868
APZ52935.1
PFAM: Transposase C of IS166 homeodomain; zinc-finger binding domain of transposase IS66; IS66 C-terminal element; Transposase IS66 family.
 
  
 0.793
APZ53829.1
PFAM: Transposase C of IS166 homeodomain; zinc-finger binding domain of transposase IS66; IS66 C-terminal element; Transposase IS66 family.
 
  
 0.494
APZ52232.1
PFAM: Transposase C of IS166 homeodomain; zinc-finger binding domain of transposase IS66; IS66 C-terminal element; Transposase IS66 family.
 
  
 0.480
APZ52255.1
PFAM: Transposase C of IS166 homeodomain; zinc-finger binding domain of transposase IS66; IS66 C-terminal element; Transposase IS66 family.
 
  
 0.480
APZ52231.1
Transposase; PFAM: IS66 Orf2 like protein.
 
  
 0.450
APZ52256.1
Transposase; PFAM: IS66 Orf2 like protein.
 
  
 0.450
APZ53828.1
Transposase; PFAM: IS66 Orf2 like protein.
 
  
 0.442
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.