STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ53127.1Phage terminase-like protein, large subunit; PFAM: Phage Terminase. (557 aa)    
Predicted Functional Partners:
APZ53128.1
Phage prohead protease, HK97 family; PFAM: Caudovirus prohead serine protease; TIGRFAM: phage prohead protease, HK97 family.
 
     0.909
APZ53129.1
PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
 
     0.875
APZ53132.1
PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
   
 0.856
APZ51235.1
PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
   
 0.796
APZ51233.1
PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
 
     0.751
APZ51234.1
Protease subunit of ATP-dependent protease; PFAM: Clp protease; Belongs to the peptidase S14 family.
 
     0.732
APZ53125.1
AAA domain-containing protein; PFAM: AAA domain.
  
  
 0.525
APZ53126.1
Hypothetical protein.
     
 0.471
APZ53130.1
Hypothetical protein.
       0.449
APZ53131.1
Hypothetical protein.
       0.449
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.