STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ54861.1Putative peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (195 aa)    
Predicted Functional Partners:
APZ54863.1
Hypothetical protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
     0.943
APZ54860.1
PFAM: Ketopantoate reductase PanE/ApbA; NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain.
 
     0.917
APZ54862.1
Hypothetical protein.
       0.782
APZ54859.1
Spermidine/putrescine transport system substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein.
 
     0.751
APZ52911.1
Putative flavoprotein involved in K+ transport; PFAM: L-lysine 6-monooxygenase (NADPH-requiring).
 
     0.734
APZ54864.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
       0.615
APZ54865.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
       0.615
APZ54858.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.553
APZ54856.1
PFAM: ABC transporter; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; Belongs to the ABC transporter superfamily.
     0.539
APZ54857.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.523
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.