STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ55159.1PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family. (86 aa)    
Predicted Functional Partners:
APZ55160.1
Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
    
0.790
APZ51026.1
PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
     0.775
APZ55161.1
PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
    
0.686
APZ52423.1
Hypothetical protein.
   
    0.515
clpB
ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.511
APZ52802.1
ATP-dependent Clp protease ATP-binding subunit ClpA; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain, pathogenicity island component; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; Belongs to the ClpA/ClpB family.
  
 
 0.511
APZ55155.1
ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain, pathogenicity island component; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); Belongs to the ClpA/ClpB family.
  
 
 0.511
APZ51028.1
ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain, pathogenicity island component; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); Belongs to the ClpA/ClpB family.
  
 
 0.511
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.437
APZ54318.1
Putative chaperone protein; PFAM: Hsp70 protein.
  
 
 0.426
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.