STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ51122.1Cobalt-zinc-cadmium efflux system protein; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. (312 aa)    
Predicted Functional Partners:
APZ51120.1
Putative permease, DMT superfamily; PFAM: EamA-like transporter family.
     0.949
APZ52076.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Alpha/beta hydrolase family.
 
      0.779
APZ51058.1
PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter.
 
   
 0.627
APZ51125.1
PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily.
    
 0.566
APZ51121.1
Hypothetical protein.
       0.556
APZ51123.1
PFAM: Tetratricopeptide repeat; TIGRFAM: cytochrome c-type biogenesis protein CcmI.
       0.509
APZ51124.1
Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
       0.509
APZ51126.1
PFAM: Cytochrome C assembly protein; Cytochrome c-type biogenesis protein CcmF C-terminal; TIGRFAM: c-type cytochrome biogenesis protein CcmF.
       0.509
APZ52734.1
PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
  
 0.461
APZ51108.1
PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
  
 0.461
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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