STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW74292.1Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
AOW74293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
AOW74283.1
Holliday junction resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.606
A4V11_04370
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
AOW74287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.561
AOW74272.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.555
AOW74294.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.531
AOW75373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.510
AOW74273.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.475
AOW74259.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.401
Your Current Organism:
Pediococcus acidilactici
NCBI taxonomy Id: 1254
Other names: BCRC 80335 [[Pediococcus lolii]], CCUG 32235, CIP 103408, DSM 19927 [[Pediococcus lolii]], DSM 20284, JCM 15055 [[Pediococcus lolii]], LMG 11384, LMG:11384, Lactobacillus sp. Lact11, NCFB 2767, NCIMB 12174, P. acidilactici, Pediococcus lindneri, Pediococcus lolii, Pediococcus lolii Doi et al. 2009, strain B213c, strain Back S213C, strain NGRI 0510Q [[Pediococcus lolii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.