STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001544355_00266Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_001544355_01218
Unannotated protein.
 
  
 0.726
GCA_001544355_01738
Unannotated protein.
 
  
 0.684
GCA_001544355_01405
Unannotated protein.
 
     0.603
GCA_001544355_01737
Unannotated protein.
 
   
 0.602
GCA_001544355_03468
Unannotated protein.
  
 
  0.575
GCA_001544355_01746
Unannotated protein.
     
 0.557
GCA_001544355_01736
Unannotated protein.
     
 0.533
GCA_001544355_03420
Unannotated protein.
     
 0.530
GCA_001544355_01407
Unannotated protein.
  
     0.518
GCA_001544355_00201
Unannotated protein.
   
 
  0.515
Your Current Organism:
Alicyclobacillus acidiphilus
NCBI taxonomy Id: 1255277
Other names: A. acidiphilus NBRC 100859, Alicyclobacillus acidiphilus NBRC 100859
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.