STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001544355_01406Unannotated protein. (243 aa)    
Predicted Functional Partners:
GCA_001544355_01407
Unannotated protein.
 
    0.969
GCA_001544355_01405
Unannotated protein.
 
    
0.847
GCA_001544355_01404
Unannotated protein.
 
    0.741
GCA_001544355_01408
Unannotated protein.
       0.562
GCA_001544355_00266
Unannotated protein.
 
     0.509
GCA_001544355_01403
Unannotated protein.
       0.455
GCA_001544355_00914
Unannotated protein.
  
     0.444
GCA_001544355_01409
Unannotated protein.
     
 0.434
Your Current Organism:
Alicyclobacillus acidiphilus
NCBI taxonomy Id: 1255277
Other names: A. acidiphilus NBRC 100859, Alicyclobacillus acidiphilus NBRC 100859
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.