STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN15834.1Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family. (256 aa)    
Predicted Functional Partners:
SJN37011.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.687
SJN15809.1
Fructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
  0.617
SJN15823.1
Hypothetical protein.
       0.610
SJN43193.1
PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
  
 
 0.574
SJN15847.1
SpoU rRNA methylase family protein.
       0.541
SJN19511.1
Lactate-responsive regulator LldR in Actinobacteria, GntR family.
  
    0.475
SJN16276.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.473
SJN42097.1
Transcriptional regulator, GntR family.
  
    0.467
SJN31921.1
POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN.
   
  
 0.427
SJN27711.1
InkR.
   
    0.426
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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