STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN16248.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SJN26923.1
5'-nucleotidase.
  
 
 0.764
SJN16254.1
Putative inner membrane protein; Belongs to the UPF0597 family.
       0.675
SJN34922.1
Cell division protein FtsK.
    
 
 0.636
SJN38895.1
Cell wall anchoring protein.
  
 0.557
SJN41631.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.553
SJN17403.1
Hypothetical protein.
    
  0.527
SJN16268.1
Peptidoglycan N-acetylglucosamine deacetylase.
    
  0.495
SJN24046.1
Hypothetical protein.
  
  0.489
SJN27900.1
Proline-rich protein.
  
  0.489
SJN39679.1
Putative DNA-binding protein.
  
  0.489
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.