STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN19498.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
SJN19389.1
Hypothetical protein.
  
     0.774
SJN17883.1
Oxidoreductase FAD/NAD(P)-binding domain protein.
     
 0.733
SJN19511.1
Lactate-responsive regulator LldR in Actinobacteria, GntR family.
       0.689
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
  
 0.591
SJN38904.1
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase); Belongs to the globin family.
     
 0.509
SJN36202.1
Hypothetical protein.
  
     0.486
SJN16846.1
DUF1526 domain-containing protein.
     
 0.464
SJN32088.1
L-fuco-beta-pyranose dehydrogenase.
  
  
  0.453
SJN19522.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.449
SJN26077.1
Hypothetical protein.
  
  
  0.446
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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