STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN20802.1Sialidase. (290 aa)    
Predicted Functional Partners:
SJN20790.1
Sialidase.
     0.994
SJN41960.1
Beta-galactosidase.
  
 0.874
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.533
SJN20812.1
Two-component system sensor kinase.
       0.491
SJN20822.1
DNA-binding response regulator, LuxR family.
       0.491
SJN20779.1
Transcriptional regulator, GntR family.
 
     0.452
SJN32220.1
Eukaryotic-type low-affinity urea transporter.
  
     0.434
SJN15360.1
DNA repair helicase.
   
    0.418
SJN17340.1
DNA/RNA helicase of DEAD/DEAH box family.
   
    0.418
SJN19246.1
DNA or RNA helicases of superfamily II.
   
    0.418
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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