STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN20863.1Transcriptional regulator, LacI family. (343 aa)    
Predicted Functional Partners:
SJN26152.1
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr / DHA-specific EI component; Belongs to the PEP-utilizing enzyme family.
   
 
 0.860
SJN32576.1
Glutamate synthase [NADPH] large chain.
    
 
 0.858
SJN43193.1
PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
    
 0.777
SJN41974.1
Transcriptional regulator, LacI family.
  
     0.774
SJN42642.1
Transcriptional regulator, LacI family.
  
     0.761
SJN41589.1
Transcriptional regulator, LacI family.
  
     0.745
SJN20881.1
Amylo-alpha-1,6-glucosidase.
 
     0.611
SJN43245.1
Malonyl CoA-acyl carrier protein transacylase.
    
 
 0.600
SJN41921.1
PTS system, N-acetylmuramic acid-specific IIB component / PTS system, N-acetylmuramic acid-specific IIC component.
    
 0.556
SJN25956.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
  0.522
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.