STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN24548.1Transcriptional regulator. (104 aa)    
Predicted Functional Partners:
SJN45613.1
PspA/IM30 family protein.
  
 
 0.917
SJN24559.1
Two-component system sensor kinase.
 
    0.751
SJN24553.1
Hypothetical protein.
       0.572
SJN24562.1
Regulatory protein, LuxR:Response regulator receiver.
 
    0.561
SJN16419.1
Osmosensitive K+ channel histidine kinase KdpD.
   
   0.477
SJN19629.1
Probable two-component sensor kinase.
   
   0.477
SJN27928.1
Osmosensitive K+ channel histidine kinase kdpD.
   
   0.477
SJN35778.1
Sensor histidine kinase MtrB.
   
   0.477
SJN43303.1
Hypothetical protein.
 
    0.425
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.