STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN25878.1Glycerol-3-phosphate regulon repressor, DeoR family. (275 aa)    
Predicted Functional Partners:
SJN19105.1
PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component.
 
  
 0.882
SJN19116.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.848
SJN25886.1
Ribose 5-phosphate isomerase B.
  
 
 0.733
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.698
SJN23275.1
Protein acetyltransferase.
    
   0.693
SJN25868.1
Metallo-beta-lactamase family protein, RNA-specific.
       0.566
SJN27094.1
Sorbitol operon transcription regulator.
  
  
 0.527
SJN25132.1
Ribose 5-phosphate isomerase B / Galactose 6-phosphate isomerase.
  
 
 0.464
SJN25895.1
Hypothetical protein.
 
     0.463
SJN25956.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
    
  0.436
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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