STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN26715.13-hydroxyacyl-CoA dehydrogenase-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)    
Predicted Functional Partners:
SJN43245.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.897
SJN26707.1
Glutaryl-CoA dehydrogenase.
 
 0.894
SJN37011.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.893
SJN32576.1
Glutamate synthase [NADPH] large chain.
     
 0.822
SJN17883.1
Oxidoreductase FAD/NAD(P)-binding domain protein.
   
 0.812
SJN42226.1
Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.
  
 
 0.810
SJN39722.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.800
SJN39704.1
Malonyl CoA-acyl carrier protein transacylase.
 
 0.765
SJN26152.1
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr / DHA-specific EI component; Belongs to the PEP-utilizing enzyme family.
   
 
 0.761
SJN43193.1
PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
     
 0.759
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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