STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN27238.1Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1). (271 aa)    
Predicted Functional Partners:
SJN27231.1
L-Cystine ABC transporter, permease protein TcyB.
 0.999
SJN32068.1
ABC amino acid transporter, permease component.
 0.994
SJN18877.1
ABC transporter membrane-spanning permease-glutamine transport.
 0.980
SJN18884.1
ABC-type amino acid transport system, permease component.
 0.958
SJN32060.1
Probable solute binding protein of ABC transporter system; Belongs to the bacterial solute-binding protein 3 family.
 0.939
SJN18871.1
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1).
 0.933
SJN37135.1
Lipid A export ATP-binding/permease protein MsbA.
 
     
0.900
SJN37128.1
Lipid A export ATP-binding/permease protein MsbA.
 
     
0.899
SJN41367.1
Putative ABC iron siderophore transporter, fused permease and ATPase domains.
 
     
0.899
SJN33437.1
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2).
 
   
 0.897
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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