STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN28057.1Putative ABC transport system integral membrane protein. (469 aa)    
Predicted Functional Partners:
SJN28067.1
Putative ABC transporter ATP-binding protein.
 
  0.938
SJN20504.1
ABC transporter, ATP-binding protein.
  
  0.696
SJN20908.1
Methionine ABC transporter ATP-binding protein.
  
  0.696
SJN28167.1
Methionine ABC transporter ATP-binding protein.
  
  0.696
SJN36320.1
ABC transport system ATP-binding protein.
  
  0.696
SJN38602.1
ABC transporter ATP-binding protein.
  
  0.696
SJN38618.1
Putative secreted protein.
  
  0.694
SJN28049.1
Lanthionine biosynthesis protein LanL.
 
    0.670
SJN38119.1
Conserved protein with diacylglycerol kinase catalytic domain.
  
     0.668
SJN44182.1
Prophage LambdaBa01, acyltransferase.
  
     0.624
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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