STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN29045.1Nucleoside ABC transporter, periplasmic nucleoside-binding protein. (370 aa)    
Predicted Functional Partners:
SJN29052.1
ABC transporter ATP-binding protein.
 
 
 0.996
SJN29066.1
Nucleoside ABC transporter, permease protein 2; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
SJN29060.1
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
SJN42298.1
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1).
 
  
  0.789
SJN45086.1
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2).
 
  
  0.734
SJN29073.1
Cytidine deaminase.
 
   
 0.698
SJN29081.1
Adenosine deaminase.
       0.632
SJN29030.1
Magnesium and cobalt efflux protein CorC.
       0.529
SJN29037.1
Hypothetical protein.
       0.503
SJN34809.1
Thymidine phosphorylase.
 
   
 0.477
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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