STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN29066.1Nucleoside ABC transporter, permease protein 2; Belongs to the binding-protein-dependent transport system permease family. (450 aa)    
Predicted Functional Partners:
SJN29052.1
ABC transporter ATP-binding protein.
 
 0.999
SJN29060.1
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SJN29045.1
Nucleoside ABC transporter, periplasmic nucleoside-binding protein.
 
 
 0.994
SJN42298.1
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1).
  
  0.870
SJN29073.1
Cytidine deaminase.
 
  
 0.865
SJN29081.1
Adenosine deaminase.
       0.818
SJN45086.1
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2).
  
  0.802
SJN45092.1
Various polyols ABC transporter, ATP-binding component.
  
  0.620
SJN45128.1
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE.
  
  
  0.572
SJN45138.1
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
  
  0.565
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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