STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN29175.1Putative ATP-binding protein. (195 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 0.978
SJN45221.1
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 0.913
pyrH
Uridine monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.889
cmk
Cytidylate kinase.
   
 
 0.887
SJN29073.1
Cytidine deaminase.
    
 0.881
pyrR
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
     
 0.874
SJN22287.1
Orotidine 5'-phosphate decarboxylase.
   
 0.858
SJN30361.1
Hypothetical protein.
    
  0.835
SJN44805.1
Helicase, SNF2/RAD54 family.
    
 0.827
SJN22731.1
D-3-phosphoglycerate dehydrogenase.
   
  0.817
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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