STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN30829.1Methyltransferase type 11. (250 aa)    
Predicted Functional Partners:
SJN43245.1
Malonyl CoA-acyl carrier protein transacylase.
    
 0.828
SJN30846.1
Iron-dependent repressor IdeR/DtxR.
       0.803
SJN30837.1
Hypothetical protein.
       0.769
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.695
SJN30855.1
Hypothetical protein.
       0.663
SJN30862.1
Hypothetical protein.
       0.654
SJN30867.1
Hypothetical protein.
       0.602
SJN30820.1
Thiosulfate sulfurtransferase, rhodanese; Belongs to the thioredoxin family.
   
   0.585
SJN27244.1
Non-ribosomal peptide synthetase, terminal component.
   
 0.581
SJN18977.1
Putative cytochrome P450 hydroxylase.
    
 0.580
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.