STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN35349.1Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1); Belongs to the ABC transporter superfamily. (598 aa)    
Predicted Functional Partners:
SJN35360.1
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1).
 
 0.998
SJN33437.1
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2).
 
 0.994
SJN23770.1
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1).
 
 0.993
SJN35366.1
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2).
 
 0.988
SJN35373.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1).
 
 0.983
SJN23817.1
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2).
 
 0.979
SJN33447.1
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2).
 
 0.945
SJN45923.1
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2).
 
 
 0.914
SJN23762.1
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1).
 
 
 0.908
SJN23828.1
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1).
 
 0.885
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.