STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN35787.1LpqB. (577 aa)    
Predicted Functional Partners:
SJN35778.1
Sensor histidine kinase MtrB.
    0.882
SJN35767.1
Two component sensory transduction transcriptional regulatory protein MtrA.
     
 0.728
SJN39497.1
Uncharacterized protein Q1 colocalized with Q.
  
     0.651
SJN39730.1
Hypothetical protein.
  
     0.633
SJN35796.1
Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy.
       0.586
SJN35759.1
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
       0.558
SJN28472.1
Hypothetical protein.
  
     0.485
SJN42914.1
CONSERVED MEMBRANE PROTEIN.
  
     0.474
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.457
SJN26942.1
GCN5-related N-acetyltransferase, FIGfam019367.
  
     0.449
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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