STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN39766.1Hypothetical protein. (346 aa)    
Predicted Functional Partners:
SJN39752.1
Hypothetical protein.
 
  
 0.987
SJN39760.1
Conserved protein, putative BatA (bacteroides aerotolerance operon).
 
  
 0.987
SJN39771.1
MoxR-like ATPase.
  
 0.976
SJN41131.1
Hypothetical protein.
  
     0.726
SJN45409.1
MoxR-like ATPases.
  
 0.724
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.701
SJN39744.1
Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.693
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
      
 0.640
SJN43412.1
L-malyl-CoA/beta-methylmalyl-CoA lyase, actinobacterial type; Belongs to the HpcH/HpaI aldolase family.
      
 0.623
SJN26290.1
Hypothetical protein.
  
     0.613
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.