STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN41362.1HNH endonuclease. (471 aa)    
Predicted Functional Partners:
SJN36312.1
Putative ABC transporter, permease protein.
  
 0.947
SJN43193.1
PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
     
 0.728
SJN20504.1
ABC transporter, ATP-binding protein.
  
 0.656
SJN20908.1
Methionine ABC transporter ATP-binding protein.
  
 0.656
SJN28067.1
Putative ABC transporter ATP-binding protein.
  
 0.656
SJN28167.1
Methionine ABC transporter ATP-binding protein.
  
 0.656
SJN36320.1
ABC transport system ATP-binding protein.
  
 0.656
SJN38602.1
ABC transporter ATP-binding protein.
  
 0.656
SJN38618.1
Putative secreted protein.
  
 0.656
SJN45603.1
Glycerate kinase.
  
     0.572
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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