STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN42097.1Transcriptional regulator, GntR family. (238 aa)    
Predicted Functional Partners:
SJN42086.1
Hypothetical protein.
     0.805
SJN19511.1
Lactate-responsive regulator LldR in Actinobacteria, GntR family.
  
     0.770
SJN24860.1
Transcriptional regulator, GntR family.
  
     0.755
SJN20779.1
Transcriptional regulator, GntR family.
  
     0.753
SJN17883.1
Oxidoreductase FAD/NAD(P)-binding domain protein.
    
  0.699
SJN42077.1
D-beta-hydroxybutyrate dehydrogenase.
 
     0.637
SJN36002.1
Transcriptional regulator, GntR family.
  
  
 0.621
SJN42104.1
Nucleoside-diphosphate-sugar epimerases.
       0.618
SJN41947.1
Transcriptional regulator, IclR family.
  
  
 0.596
SJN42090.1
Low-affinity gluconate/H+ symporter GntU.
     
 0.552
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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