STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN42354.1Putative integral membrane protein. (250 aa)    
Predicted Functional Partners:
SJN42360.1
Myo-inositol 2-dehydrogenase.
 
     0.745
SJN42346.1
Myo-inositol 2-dehydrogenase.
 
     0.729
SJN18061.1
Uroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase.
    
  0.632
pheT
Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.508
SJN42338.1
Transaldolase.
 
     0.495
SJN42728.1
Hypothetical protein.
  
     0.494
SJN15477.1
CoA-disulfide reductase / Disulfide bond regulator; Belongs to the sulfur carrier protein TusA family.
  
  
 0.489
SJN42325.1
5-deoxy-glucuronate isomerase.
 
     0.415
SJN42316.1
Epi-inositol hydrolase; Belongs to the TPP enzyme family.
 
     0.402
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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