STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN42388.1Inositol transport system permease protein. (369 aa)    
Predicted Functional Partners:
SJN42381.1
Inositol transport system ATP-binding protein.
 0.993
SJN42395.1
Inositol transport system sugar-binding protein.
 
 0.993
SJN42265.1
Possible fucose ABC transporter, substrate-binding component.
 0.979
SJN42282.1
Possible fucose ABC transporter, substrate-binding component.
 0.970
SJN45092.1
Various polyols ABC transporter, ATP-binding component.
 0.954
SJN42298.1
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1).
 0.945
SJN45086.1
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2).
 0.943
SJN45077.1
Xylose ABC transporter, periplasmic xylose-binding protein XylF.
 
  
 0.791
SJN45081.1
Xylose ABC transporter, permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
  
 
0.769
SJN42373.1
Probable transporter.
       0.664
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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