STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN42835.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
SJN28049.1
Lanthionine biosynthesis protein LanL.
  
     0.745
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
       0.697
SJN22964.1
Hypothetical protein.
  
     0.642
SJN31623.1
Cholesterol oxidase.
  
     0.574
SJN18328.1
Hypothetical protein.
  
     0.566
SJN36202.1
Hypothetical protein.
  
     0.545
SJN33555.1
Lycopene beta cyclase.
  
     0.510
SJN27551.1
Polysaccharide deacetylase domain protein.
  
     0.476
SJN42839.1
Hypothetical protein.
       0.423
SJN43886.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.