STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJN45878.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
SJN45874.1
Beta-glucosidase.
       0.773
SJN44952.1
Protein of unknown function DUF664.
  
     0.701
SJN21535.1
Hypothetical protein.
  
     0.632
SJN41179.1
GCN5-related N-acetyltransferase.
  
     0.591
SJN45883.1
Hypothetical protein.
       0.545
SJN38538.1
Aspartokinase; Belongs to the aspartokinase family.
     
 0.484
SJN16720.1
Transcriptional regulator, TetR family.
  
     0.464
SJN16737.1
Hypothetical protein.
  
     0.450
SJN32988.1
Putative RNA polymerase ECF-subfamily sigma factor.
  
     0.450
SJN25632.1
Hypothetical protein.
  
   
 0.429
Your Current Organism:
Luteococcus japonicus
NCBI taxonomy Id: 1255658
Other names: L. japonicus LSP_Lj1, Luteococcus japonicus LSP_Lj1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.