STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUD07313.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
EUD07339.1
Hypothetical protein.
  
 
 0.731
EUD07447.1
Hypothetical protein.
     
 0.657
EUD07484.1
Putative protein MatC.
  
   
0.560
matB
Fimbrillin MatB.
  
  
 0.494
EUD06298.1
Hypothetical protein.
  
 
 0.430
Your Current Organism:
Providencia alcalifaciens
NCBI taxonomy Id: 1256989
Other names: P. alcalifaciens R90-1475, Providencia alcalifaciens R90-1475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.