STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM58385.1TonB-dependent receptor plug; COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1101 aa)    
Predicted Functional Partners:
AHM58386.1
RagB/SusD domain-containing protein.
 
     0.880
AHM63168.1
RagB/SusD domain-containing protein.
 
     0.771
AHM60264.1
RagB/SusD domain-containing protein.
  
     0.766
AHM62230.1
RagB/SusD domain-containing protein.
 
     0.763
AHM61173.1
RagB/SusD domain-containing protein.
  
     0.758
AHM59701.1
RagB/SusD domain protein.
 
     0.756
AHM61105.1
SusD/RagB family protein.
 
     0.750
AHM58468.1
RagB/SusD domain-containing protein.
  
     0.735
AHM58387.1
COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.670
AHM58384.1
COG3712 Fe2+-dicitrate sensor, membrane component.
 
    0.650
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.