STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM58411.1UDP-glucose 4-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases. (326 aa)    
Predicted Functional Partners:
AHM63075.1
Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 0.966
AHM61768.1
COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.903
AHM61774.1
Lipopolysaccharide biosynthesis protein WbpB; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.903
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.902
AHM59524.1
UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 
 0.810
AHM58416.1
Capsular polysaccharide biosynthesis glycosyl transferase; COG0438 Glycosyltransferase.
 
    0.611
AHM60933.1
COG0438 Glycosyltransferase.
  
    0.544
AHM61724.1
Nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase.
 
 0.540
AHM58412.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.538
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
  0.537
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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