STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM58618.1Pas sensor protein; COG2203 FOG: GAF domain. (791 aa)    
Predicted Functional Partners:
AHM63257.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
 
 
0.956
AHM58867.1
COG0642 Signal transduction histidine kinase.
 
 
0.896
AHM59833.1
Mcp methyltransferase, cher-type; COG1352 Methylase of chemotaxis methyl-accepting proteins.
 
  
 0.723
AHM59839.1
COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.719
AHM58866.1
MCP methyltransferase, CheR-type; COG1352 Methylase of chemotaxis methyl-accepting proteins.
 
  
 0.702
AHM59022.1
COG0642 Signal transduction histidine kinase.
 
 
 0.702
AHM59837.1
Hypothetical protein.
 
     0.698
AHM58604.1
PAS domain-containing protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.688
AHM62965.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 
 0.688
AHM59838.1
Hypothetical protein.
  
     0.649
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.