STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM58816.1Manganese ABC transporter manganese binding lipoprotein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family. (316 aa)    
Predicted Functional Partners:
AHM58813.1
ABC-3 protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 0.999
AHM58814.1
ABC-3 protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 0.999
AHM58815.1
COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 
 0.998
AHM58817.1
Iron (metal) dependent repressor, dtxr family protein; COG1321 Mn-dependent transcriptional regulator.
 
  
 0.880
AHM62389.1
Cobalamin synthesis protein P47K; COG0523 Putative GTPases (G3E family).
 
  
 0.774
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.668
rpmB
COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.661
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
   0.554
AHM58818.1
Hypothetical protein.
       0.517
AHM58812.1
Thioredoxin-related protein-like protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.504
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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